STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEC16391.1Integrating conjugative element membrane protein, PFL_4697 family. (232 aa)    
Predicted Functional Partners:
AEC16392.1
Type IV secretion-system coupling protein DNA-binding domain protein.
 
     0.951
AEC16393.1
Integrating conjugative element protein, PFL_4695 family.
 
     0.951
AEC16394.1
Putative lytic transglycosylase, catalytic.
 
     0.951
AEC16395.1
Integrating conjugative element protein, PFL_4693 family.
 
     0.951
AEC16407.1
Hypothetical protein.
 
     0.798
AEC16360.1
Integrating conjugative element protein, PFL_4710 family.
 
     0.794
AEC16361.1
Integrating conjugative element protein, PFL_4711 family.
 
     0.794
AEC16369.1
TraG-like protein, N-terminal region protein.
 
     0.794
AEC16372.1
F pilus assembly Type-IV secretion system for plasmid transfer.
 
     0.794
AEC16373.1
Conjugative transfer region lipoprotein, TIGR03751 family.
 
     0.794
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis UMN179, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179
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