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UMN179_00357 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00357" - Putative lytic transglycosylase, catalytic in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00357Putative lytic transglycosylase, catalytic (230 aa)    
Predicted Functional Partners:
UMN179_00358
Integrating conjugative element protein (252 aa)
 
        0.975
UMN179_00354
Integrating conjugative element membrane protein (232 aa)
 
        0.975
UMN179_00355
Type IV secretion-system coupling protein DNA-binding domain-containing protein (742 aa)
 
        0.974
UMN179_00359
Integrating conjugative element protein PilL (202 aa)
 
        0.969
UMN179_00356
Integrating conjugative element protein (172 aa)
 
          0.967
UMN179_00353
Hypothetical protein (81 aa)
              0.824
UMN179_00370
Hypothetical protein (171 aa)
 
        0.817
UMN179_00382
Plasmid-partitioning protein SopA (270 aa)
 
        0.814
UMN179_00339
Integrating conjugative element protein (221 aa)
 
        0.802
UMN179_00337
Integrating conjugative element protein (485 aa)
 
        0.802
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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