STRINGSTRING
UMN179_00375 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00375" - Integrating conjugative element protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00375Integrating conjugative element protein (243 aa)    
Predicted Functional Partners:
UMN179_00374
Hypothetical protein (166 aa)
 
          0.973
UMN179_00378
Hypothetical protein (449 aa)
 
   
  0.935
UMN179_00380
ParB-like nuclease domain-containing protein (562 aa)
 
   
  0.922
UMN179_00379
Hypothetical protein (188 aa)
 
   
  0.910
UMN179_00382
Plasmid-partitioning protein SopA (270 aa)
 
   
  0.880
UMN179_00359
Integrating conjugative element protein PilL (202 aa)
   
        0.874
UMN179_00339
Integrating conjugative element protein (221 aa)
   
        0.868
UMN179_00337
Integrating conjugative element protein (485 aa)
   
        0.862
UMN179_00338
Integrating conjugative element protein (291 aa)
   
        0.846
UMN179_00336
Conjugative transfer region lipoprotein (129 aa)
   
        0.846
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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