STRINGSTRING
UMN179_00407 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00407" - Uracil transporter in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00407Uracil transporter (412 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (208 aa)
 
   
  0.931
UMN179_00406
DNA replication initiation factor (253 aa)
   
   
  0.756
carA
Carbamoyl phosphate synthase small subunit (385 aa)
   
   
  0.628
UMN179_02422
Inosine 5’-monophosphate dehydrogenase (523 aa)
   
   
  0.619
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
   
   
  0.568
UMN179_00049
Cytosine deaminase (420 aa)
   
   
  0.561
UMN179_01679
Cytosine deaminase-like metal-dependent hydrolase (329 aa)
   
        0.552
UMN179_00875
Carbamoyl phosphate synthase large subunit (1062 aa)
   
   
  0.548
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (231 aa)
   
   
  0.529
purM
Phosphoribosylaminoimidazole synthetase (346 aa)
   
   
  0.509
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (7%) [HD]