STRINGSTRING
UMN179_00496 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00496" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00496Hypothetical protein (455 aa)    
Predicted Functional Partners:
UMN179_00307
Outer membrane protein A (247 aa)
   
          0.666
UMN179_00538
VirK protein (293 aa)
   
          0.649
UMN179_00495
Hypothetical protein (248 aa)
              0.644
UMN179_01035
Nickel uptake substrate-specific transmembrane region (265 aa)
   
          0.622
UMN179_00388
Phosphoglycerate mutase (210 aa)
   
          0.585
UMN179_00175
Hypothetical protein (287 aa)
   
          0.579
UMN179_02383
Phage holin family (79 aa)
   
          0.552
UMN179_00858
Hypothetical protein (74 aa)
   
          0.549
UMN179_02177
Virulence factor hemolysin (211 aa)
   
          0.540
UMN179_01902
Hypothetical protein (133 aa)
   
          0.521
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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