STRINGSTRING
UMN179_00498 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00498" - Putative periplasmic/secreted protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00498Putative periplasmic/secreted protein (240 aa)    
Predicted Functional Partners:
UMN179_00499
Hypothetical protein (180 aa)
 
          0.838
UMN179_00268
Hypothetical protein (297 aa)
   
          0.758
UMN179_00501
DNA polymerase III subunit delta’ (333 aa)
 
          0.698
UMN179_00497
FKBP-type peptidyl-prolyl cis-trans isomerase (189 aa)
              0.686
UMN179_00503
Hypothetical protein (349 aa)
              0.654
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (210 aa)
              0.654
UMN179_00500
Putative metallodependent hydrolase (261 aa)
              0.654
UMN179_00136
Hypothetical protein (251 aa)
   
          0.630
UMN179_00600
Hypothetical protein (469 aa)
   
          0.542
UMN179_00489
Hypothetical protein (163 aa)
   
          0.499
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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