STRINGSTRING
UMN179_00538 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00538" - VirK protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00538VirK protein (293 aa)    
Predicted Functional Partners:
UMN179_01009
Type II secretory pathway, component PulJ (240 aa)
   
          0.674
UMN179_01010
Prepilin-type N-terminal cleavage/methylation domain-containing protein (177 aa)
   
          0.666
UMN179_00576
Hypothetical protein (472 aa)
   
          0.662
UMN179_00496
Hypothetical protein (455 aa)
   
          0.649
argA
N-acetylglutamate synthase (442 aa)
              0.588
UMN179_00537
Sodium-sulfate symporter transmembrane region (480 aa)
              0.543
yihI
Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis (188 aa)
   
          0.484
UMN179_00006
Hypothetical protein (465 aa)
   
          0.477
UMN179_01910
Glutamine ABC transporter permease (220 aa)
     
 
    0.467
UMN179_02416
Hypothetical protein (244 aa)
   
        0.465
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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