STRINGSTRING
UMN179_00547 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00547" - Integrase in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00547Integrase (129 aa)    
Predicted Functional Partners:
UMN179_02439
Transposase (80 aa)
 
          0.600
UMN179_02380
Transposase (80 aa)
 
          0.600
UMN179_01305
Transposase (166 aa)
 
   
  0.545
UMN179_00552
Transposase (173 aa)
 
   
  0.542
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
       
    0.538
UMN179_02440
Transposase (173 aa)
 
   
  0.535
UMN179_02382
Transposase (119 aa)
 
   
  0.489
UMN179_02355
Transposase (119 aa)
 
   
  0.489
UMN179_00546
Gliding motility-associated protein GldE (420 aa)
              0.486
UMN179_00835
2-octaprenyl-6-methoxyphenyl hydroxylase (395 aa)
       
    0.464
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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