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UMN179_00549 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00549" - Opacity family porin protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00549Opacity family porin protein (195 aa)    
Predicted Functional Partners:
UMN179_00656
Hypothetical protein (142 aa)
   
          0.731
UMN179_02063
Putative mercuric transport protein (120 aa)
   
          0.678
UMN179_02064
Putative mercuric reductase (97 aa)
   
          0.670
UMN179_00548
Putative lipoprotein (149 aa)
              0.657
UMN179_01876
Periplasmic chaperone (175 aa)
     
      0.629
UMN179_00550
Hypothetical protein (129 aa)
              0.609
UMN179_01035
Nickel uptake substrate-specific transmembrane region (265 aa)
   
          0.595
UMN179_02047
Cell envelope integrity inner membrane protein TolA (422 aa)
   
          0.563
UMN179_01050
Putative transmembrane protein (228 aa)
   
          0.557
UMN179_02133
Ferric enterobactin transport protein FepE (401 aa)
   
          0.545
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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