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xylA protein (Gallibacterium anatis) - STRING interaction network
"xylA" - Xylose isomerase in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase (439 aa)    
Predicted Functional Partners:
UMN179_00561
Glycerol kinase (481 aa)
 
 
  0.989
UMN179_00798
PTS system fructose-specific transporter subunit IIBC (562 aa)
         
  0.821
UMN179_01709
AraC family transcriptional regulator (390 aa)
 
   
  0.813
UMN179_00796
Bifunctional fructose-specific PTS IIA/HPr protein (386 aa)
         
  0.811
UMN179_00563
D-xylose transporter subunit XylF (332 aa)
 
   
  0.805
UMN179_00758
N-acetylgalactosamine-specific PTS system transporter subunit IIB (334 aa)
       
    0.802
UMN179_01577
beta-D-galactosidase (1012 aa)
       
  0.796
UMN179_01687
Aminoimidazole riboside kinase (634 aa)
         
  0.787
UMN179_01100
Aminoimidazole riboside kinase (305 aa)
         
  0.773
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose (469 aa)
   
 
  0.734
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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