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UMN179_00589 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00589" - YadA-like C-terminal region protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00589YadA-like C-terminal region protein (228 aa)    
Predicted Functional Partners:
UMN179_00631
Hypothetical protein (685 aa)
 
          0.778
UMN179_00317
Hypothetical protein (1336 aa)
   
          0.778
UMN179_00588
NAD-dependent deacetylase (228 aa)
              0.638
UMN179_00587
Sugar phosphatase (273 aa)
              0.638
UMN179_00590
Putative transposase (308 aa)
              0.598
UMN179_00307
Outer membrane protein A (247 aa)
 
   
  0.503
UMN179_01536
Branched-chain amino acid transport protein (97 aa)
   
          0.495
UMN179_00586
2’-phosphodiesterase/3’-nucleotidase (651 aa)
   
        0.487
UMN179_01378
Phospholipase/lecithinase/hemolysin (1722 aa)
   
     
  0.485
UMN179_00496
Hypothetical protein (455 aa)
   
          0.472
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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