STRINGSTRING
UMN179_00656 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00656" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00656Hypothetical protein (142 aa)    
Predicted Functional Partners:
UMN179_00655
GAF domain-containing protein (158 aa)
              0.834
UMN179_02064
Putative mercuric reductase (97 aa)
   
          0.761
UMN179_02063
Putative mercuric transport protein (120 aa)
   
          0.752
UMN179_00948
Opacity family porin protein (206 aa)
   
          0.733
UMN179_00549
Opacity family porin protein (195 aa)
   
          0.731
UMN179_02133
Ferric enterobactin transport protein FepE (401 aa)
   
          0.727
UMN179_00306
Lipopolysaccharide biosynthesis protein WzzE (370 aa)
   
          0.666
UMN179_00658
DNA-binding transcriptional repressor FabR (205 aa)
              0.653
UMN179_00657
DNA-binding transcriptional regulator OxyR (304 aa)
              0.653
UMN179_02079
Sulfatase (510 aa)
   
          0.645
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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