STRINGSTRING
UMN179_00657 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00657" - DNA-binding transcriptional regulator OxyR in Gallibacterium anatis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00657DNA-binding transcriptional regulator OxyR (304 aa)    
Predicted Functional Partners:
UMN179_00658
DNA-binding transcriptional repressor FabR (205 aa)
         
  0.867
UMN179_00526
Hydroperoxidase II (486 aa)
         
  0.805
UMN179_01699
Putative peroxiredoxin (200 aa)
         
  0.792
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (455 aa)
     
 
  0.770
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (694 aa)
   
   
  0.736
UMN179_01040
Putative DNA-binding transcriptional regulator (295 aa)
   
          0.720
UMN179_02271
Glutathione reductase (449 aa)
   
   
  0.711
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
     
   
  0.697
UMN179_00699
DNA-binding transcriptional activator GcvA (295 aa)
   
     
  0.690
UMN179_02102
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (209 aa)
         
  0.676
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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