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UMN179_00802 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00802" - IS200 transposase in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00802IS200 transposase (138 aa)    
Predicted Functional Partners:
UMN179_00803
Hypothetical protein (392 aa)
   
   
  0.786
UMN179_00528
Glutamate synthase subunit alpha (1488 aa)
              0.538
UMN179_02425
Putative transposase (367 aa)
   
   
  0.405
UMN179_02149
Putative transposase (367 aa)
   
   
  0.405
UMN179_02067
Putative transposase (340 aa)
   
   
  0.405
UMN179_01980
Putative transposase (367 aa)
   
   
  0.405
UMN179_01824
Hypothetical protein (367 aa)
   
   
  0.405
UMN179_01411
Putative transposase (367 aa)
   
   
  0.405
UMN179_01343
Putative transposase (367 aa)
   
   
  0.405
UMN179_01270
Putative transposase (378 aa)
   
   
  0.405
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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