STRINGSTRING
UMN179_00956 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00956" - Virulence protein in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00956Virulence protein (334 aa)    
Predicted Functional Partners:
UMN179_00957
Type I restriction modification DNA specificity domain-containing protein (361 aa)
   
        0.918
UMN179_00955
GIY-YIG catalytic domain-containing protein (292 aa)
              0.860
UMN179_00953
RecF/RecN/SMC N terminal domain-containing protein (369 aa)
         
  0.828
UMN179_00954
PIN domain-containing protein (144 aa)
              0.815
UMN179_00952
Type I restriction enzyme EcoKI subunit R (1082 aa)
   
        0.797
UMN179_00951
Hypothetical protein (194 aa)
              0.637
UMN179_00958
Site-specific tyrosine recombinase XerC (310 aa)
              0.570
UMN179_00962
Type I restriction and modification enzyme - subunit R C terminal protein (1019 aa)
   
        0.457
UMN179_00648
HsdR family type I site-specific deoxyribonuclease (1053 aa)
   
        0.457
UMN179_01205
N-6 DNA Methylase (539 aa)
   
        0.456
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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