STRINGSTRING
UMN179_01050 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01050" - Putative transmembrane protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01050Putative transmembrane protein (228 aa)    
Predicted Functional Partners:
UMN179_01051
Flavodoxin protein (210 aa)
          0.933
UMN179_01043
Hypothetical protein (365 aa)
   
          0.700
UMN179_01056
Hypothetical protein (370 aa)
 
          0.635
UMN179_00948
Opacity family porin protein (206 aa)
   
          0.609
UMN179_00549
Opacity family porin protein (195 aa)
   
          0.557
UMN179_00061
Universal stress protein (142 aa)
   
          0.486
UMN179_01049
Virulence-associated protein (334 aa)
              0.449
UMN179_00283
Hypothetical protein (219 aa)
   
          0.449
UMN179_01009
Type II secretory pathway, component PulJ (240 aa)
   
          0.440
UMN179_02448
Hypothetical protein (356 aa)
   
          0.435
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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