STRINGSTRING
UMN179_01116 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01116" - Ferrichrome outer membrane transporter in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01116Ferrichrome outer membrane transporter (716 aa)    
Predicted Functional Partners:
UMN179_01117
Putative transporter (586 aa)
          0.945
UMN179_01902
Hypothetical protein (133 aa)
   
          0.710
UMN179_00852
FeoA domain-containing protein (86 aa)
   
          0.545
UMN179_01115
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (215 aa)
              0.510
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase (286 aa)
       
      0.478
UMN179_02133
Ferric enterobactin transport protein FepE (401 aa)
   
          0.447
UMN179_00175
Hypothetical protein (287 aa)
   
          0.409
UMN179_00164
Putative DNA-binding transcriptional regulator (297 aa)
   
          0.403
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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