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UMN179_01208 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01208" - Type I restriction enzyme EcoKI subunit R in Gallibacterium anatis
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
UMN179_01208Type I restriction enzyme EcoKI subunit R (1114 aa)    
Predicted Functional Partners:
UMN179_01205
N-6 DNA Methylase (539 aa)
 
 
  0.988
UMN179_01207
EcoKI restriction-modification system protein HsdS (414 aa)
 
 
 
  0.979
UMN179_01206
ATPase AAA (667 aa)
 
          0.846
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (206 aa)
              0.781
gidA
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (629 aa)
              0.648
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (355 aa)
           
  0.627
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (124 aa)
           
  0.614
UMN179_00957
Type I restriction modification DNA specificity domain-containing protein (361 aa)
 
 
 
  0.560
UMN179_00644
EcoKI restriction-modification system protein HsdS (440 aa)
     
 
  0.487
UMN179_00964
EcoKI restriction-modification system protein HsdS (390 aa)
     
 
  0.481
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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