STRINGSTRING
UMN179_01579 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01579" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01579Hypothetical protein (327 aa)    
Predicted Functional Partners:
UMN179_01578
Hypothetical protein (239 aa)
 
        0.984
UMN179_01580
Hypothetical protein (330 aa)
 
        0.970
UMN179_01977
LamB/YcsF family protein (246 aa)
   
        0.564
UMN179_01577
beta-D-galactosidase (1012 aa)
              0.488
UMN179_01581
Glutamine ABC transporter permease (249 aa)
   
        0.483
UMN179_01582
Putative amino-acid ABC transporter ATP-binding protein YecC (248 aa)
   
        0.451
UMN179_00523
Methylcitrate synthase (369 aa)
     
        0.416
UMN179_00397
Type II citrate synthase (428 aa)
     
        0.416
UMN179_01979
Allophanate hydrolase subunit 1 (216 aa)
   
        0.414
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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