STRINGSTRING
UMN179_01584 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01584" - Putative transcriptional regulator in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01584Putative transcriptional regulator (100 aa)    
Predicted Functional Partners:
UMN179_01585
Hypothetical protein (127 aa)
 
          0.973
UMN179_00221
Hypothetical protein (89 aa)
 
          0.678
UMN179_00218
Putative transcriptional regulator (98 aa)
 
          0.635
UMN179_01586
Plasmid maintenance system killer protein (92 aa)
         
  0.563
UMN179_01587
Hypothetical protein (98 aa)
         
  0.549
UMN179_02354
Hypothetical protein (56 aa)
     
        0.436
UMN179_00553
DNA starvation/stationary phase protection protein Dps (159 aa)
     
        0.410
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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