STRINGSTRING
UMN179_01621 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01621" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01621Hypothetical protein (357 aa)    
Predicted Functional Partners:
UMN179_01622
Hypothetical protein (309 aa)
 
   
  0.971
UMN179_01626
Phage tail sheath protein (466 aa)
 
        0.967
UMN179_01624
Mu-like prophage protein gp36 (145 aa)
 
   
  0.966
UMN179_01627
Phage tail tube protein FII (171 aa)
 
        0.958
UMN179_01625
Gp37 protein (168 aa)
 
   
  0.954
UMN179_01620
Phage virion morphogenesis family (152 aa)
 
   
  0.908
UMN179_01617
Mu-like prophage protein gp29 (475 aa)
 
   
  0.885
UMN179_01618
Phage Mu protein F like protein (435 aa)
 
        0.875
UMN179_01616
Terminase-like family protein (436 aa)
 
        0.841
UMN179_01636
Baseplate J-like protein (371 aa)
 
   
  0.825
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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