STRINGSTRING
UMN179_01643 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01643" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01643Hypothetical protein (164 aa)    
Predicted Functional Partners:
UMN179_01644
Hypothetical protein (261 aa)
 
          0.881
UMN179_01642
Hypothetical protein (218 aa)
              0.859
UMN179_01601
Bacteriophage Mu Gam like protein (169 aa)
   
          0.740
UMN179_01622
Hypothetical protein (309 aa)
   
          0.706
UMN179_02508
D12 class N6 adenine-specific DNA methyltransferase (278 aa)
   
          0.702
UMN179_01641
Site-specific tyrosine recombinase XerC (339 aa)
              0.641
UMN179_01617
Mu-like prophage protein gp29 (475 aa)
   
          0.555
UMN179_01618
Phage Mu protein F like protein (435 aa)
   
          0.552
UMN179_01631
Phage P2 GpU (310 aa)
 
          0.540
UMN179_01626
Phage tail sheath protein (466 aa)
 
          0.526
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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