STRINGSTRING
UMN179_01644 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01644" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01644Hypothetical protein (261 aa)    
Predicted Functional Partners:
UMN179_01643
Hypothetical protein (164 aa)
 
          0.881
UMN179_01601
Bacteriophage Mu Gam like protein (169 aa)
   
          0.776
UMN179_01599
Mu B transposition protein, C terminal protein (306 aa)
   
     
  0.774
UMN179_01606
Hypothetical protein (188 aa)
   
          0.773
UMN179_00889
Phage virion morphogenesis family (153 aa)
   
          0.759
UMN179_01615
Hypothetical protein (190 aa)
   
          0.746
UMN179_01605
Mu-like prophage protein gp16 (155 aa)
   
          0.741
UMN179_01596
DNA-binding transcriptional regulator Nlp (75 aa)
 
          0.717
UMN179_01608
N-acetyl-anhydromuranmyl-L-alanine amidase (181 aa)
   
          0.715
UMN179_01597
Bacteriophage Mu transposase (653 aa)
   
     
  0.646
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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