STRINGSTRING
dadA protein (Gallibacterium anatis) - STRING interaction network
"dadA" - D-amino acid dehydrogenase small subunit in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dadAD-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids (419 aa)    
Predicted Functional Partners:
UMN179_00696
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (357 aa)
   
 
  0.995
UMN179_01887
Alanine racemase (229 aa)
         
    0.954
UMN179_00072
Sn-glycerol-3-phosphate dehydrogenase subunit C (1022 aa)
   
  0.830
UMN179_01419
Aminotransferase AlaT (404 aa)
   
 
  0.783
UMN179_02246
Aromatic amino acid aminotransferase (396 aa)
     
 
    0.774
UMN179_02055
Histidinol-phosphate aminotransferase (365 aa)
     
 
    0.774
UMN179_01800
Histidinol-phosphate aminotransferase (356 aa)
     
 
    0.774
UMN179_02028
Endoribonuclease L-PSP (117 aa)
        0.660
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (297 aa)
   
 
  0.619
nanA
N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N- acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate (293 aa)
   
 
  0.618
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (11%) [HD]