STRINGSTRING
UMN179_01673 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01673" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01673Hypothetical protein (683 aa)    
Predicted Functional Partners:
UMN179_00156
Hypothetical protein (463 aa)
 
          0.810
UMN179_00957
Type I restriction modification DNA specificity domain-containing protein (361 aa)
 
        0.540
UMN179_01207
EcoKI restriction-modification system protein HsdS (414 aa)
 
        0.455
UMN179_00952
Type I restriction enzyme EcoKI subunit R (1082 aa)
 
        0.454
UMN179_01674
Ribulose-phosphate 3-epimerase (224 aa)
              0.431
UMN179_00643
N-6 DNA Methylase (483 aa)
 
          0.426
UMN179_01205
N-6 DNA Methylase (539 aa)
 
          0.423
gph
Phosphoglycolate phosphatase (220 aa)
              0.418
trpS
tryptophanyl-tRNA synthetase (332 aa)
              0.401
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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