STRINGSTRING
UMN179_01691 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01691" - DctM-like transporter protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01691DctM-like transporter protein (424 aa)    
Predicted Functional Partners:
UMN179_01689
Family 7 extracellular solute-binding protein (335 aa)
 
 
  0.988
UMN179_01774
Family 7 extracellular solute-binding protein (327 aa)
 
  0.947
UMN179_00483
Extracellular solute-binding protein (328 aa)
 
  0.939
UMN179_00855
Family 7 extracellular solute-binding protein (334 aa)
 
  0.934
UMN179_02203
Family 7 extracellular solute-binding protein (327 aa)
 
  0.930
UMN179_01690
2,3-diketo-L-gulonate TRAP transporter small permease YiaM (160 aa)
 
          0.895
UMN179_01775
2,3-diketo-L-gulonate TRAP transporter small permease YiaM (161 aa)
 
 
  0.881
UMN179_00484
Tripartite ATP-independent periplasmic transporter, DctQ component (164 aa)
 
 
  0.832
UMN179_01692
Transcriptional repressor RbsR (334 aa)
              0.829
UMN179_01693
Aminoimidazole riboside kinase (314 aa)
              0.817
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (15%) [HD]