STRINGSTRING
UMN179_01712 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01712" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01712Hypothetical protein (104 aa)    
Predicted Functional Partners:
UMN179_01713
Polyketide cyclase/dehydrase and lipid transport (144 aa)
   
   
  0.892
UMN179_01729
Electron transport complex protein RnfB; Part of a membrane complex involved in electron transport (202 aa)
 
     
  0.843
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (454 aa)
         
  0.820
UMN179_01711
Cupin superfamily protein (401 aa)
              0.820
UMN179_01726
Electron transport complex protein RnfG; Part of a membrane complex involved in electron transport (210 aa)
 
     
  0.753
UMN179_01709
AraC family transcriptional regulator (390 aa)
 
          0.750
UMN179_01727
Electron transport complex protein RnfD; Part of a membrane complex involved in electron transport (356 aa)
 
     
  0.664
UMN179_01728
Electron transport complex protein RnfC; Part of a membrane complex involved in electron transport (816 aa)
 
     
  0.656
UMN179_00442
Hypothetical protein (206 aa)
   
          0.636
UMN179_01714
Biotin--protein ligase (314 aa)
   
        0.632
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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