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uxaC protein (Gallibacterium anatis) - STRING interaction network
"uxaC" - Glucuronate isomerase in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCGlucuronate isomerase (467 aa)    
Predicted Functional Partners:
UMN179_01773
D-mannonate oxidoreductase (282 aa)
 
   
  0.998
UMN179_00486
Altronate oxidoreductase (483 aa)
 
 
  0.994
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (394 aa)
 
   
  0.963
UMN179_01771
Hypothetical protein (313 aa)
 
          0.859
UMN179_01774
Family 7 extracellular solute-binding protein (327 aa)
 
          0.829
UMN179_01778
DNA-binding transcriptional repressor UxuR (253 aa)
 
   
  0.740
UMN179_01577
beta-D-galactosidase (1012 aa)
 
   
    0.724
UMN179_01775
2,3-diketo-L-gulonate TRAP transporter small permease YiaM (161 aa)
 
          0.707
mtlD
Mannitol-1-phosphate 5-dehydrogenase (384 aa)
   
 
  0.691
UMN179_02469
Short chain dehydrogenase (240 aa)
       
    0.635
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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