STRINGSTRING
UMN179_01777 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01777" - Alpha-xylosidase YicI in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01777Alpha-xylosidase YicI (797 aa)    
Predicted Functional Partners:
UMN179_01778
DNA-binding transcriptional repressor UxuR (253 aa)
 
          0.922
UMN179_00044
Glycogen branching protein (1513 aa)
   
 
  0.881
UMN179_01775
2,3-diketo-L-gulonate TRAP transporter small permease YiaM (161 aa)
 
          0.845
UMN179_00606
Trehalose-6-phosphate hydrolase (554 aa)
   
 
  0.806
UMN179_01776
DctM-like transporter (433 aa)
              0.796
UMN179_01687
Aminoimidazole riboside kinase (634 aa)
       
    0.787
UMN179_01101
Glycosyl hydrolase family protein (482 aa)
     
 
    0.775
UMN179_01100
Aminoimidazole riboside kinase (305 aa)
       
    0.773
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (394 aa)
              0.747
UMN179_01884
Thiol-disulfide interchange signal peptide protein (222 aa)
     
    0.693
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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