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gtxC protein (Gallibacterium anatis) - STRING interaction network
"gtxC" - RTX toxin acyltransferase GtxC in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtxCRTX toxin acyltransferase GtxC (114 aa)    
Predicted Functional Partners:
gtxA
RTX toxin GtxA (2038 aa)
 
          0.877
UMN179_01926
Lipid transporter ATP-binding/permease (703 aa)
   
          0.700
UMN179_02445
Putative hemagglutinin (2943 aa)
   
          0.628
UMN179_00416
Hemagglutination protein (3058 aa)
   
          0.627
UMN179_02244
Putative hemagglutinin (2713 aa)
   
          0.621
UMN179_01927
HlyD family secretion protein (475 aa)
   
          0.571
UMN179_02245
Putative hemolysin secretion/activation protein ShlB/FhaC/HecB (599 aa)
   
          0.490
UMN179_00415
Hemolysin secretion/activation protein ShlB/FhaC/HecB (599 aa)
   
          0.479
UMN179_02325
Putative periplasmic/secreted protein (200 aa)
   
          0.466
UMN179_00418
Hypothetical protein (638 aa)
   
          0.411
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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