STRINGSTRING
gtxA protein (Gallibacterium anatis) - STRING interaction network
"gtxA" - RTX toxin GtxA in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtxARTX toxin GtxA (2038 aa)    
Predicted Functional Partners:
gtxC
RTX toxin acyltransferase GtxC (114 aa)
 
          0.877
UMN179_01926
Lipid transporter ATP-binding/permease (703 aa)
 
     
  0.853
UMN179_01927
HlyD family secretion protein (475 aa)
 
     
  0.851
UMN179_01228
P-hydroxybenzoic acid efflux subunit AaeA (446 aa)
 
     
  0.829
UMN179_01227
Cysteine/glutathione ABC transporter membrane/ATP-binding protein (726 aa)
 
     
  0.820
UMN179_01919
Hemolysin calcium-binding protein (111 aa)
   
          0.733
UMN179_01923
Hemolysin-type calcium binding domain-containing protein (419 aa)
   
          0.708
UMN179_01346
Putative hemolysin-type protein (830 aa)
   
          0.568
UMN179_01226
Outer membrane channel protein (418 aa)
 
   
  0.492
UMN179_02109
Cytoplasmic glycerophosphodiester phosphodiesterase (274 aa)
       
    0.472
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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