STRINGSTRING
UMN179_01817 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01817" - Hypothetical protein in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01817Hypothetical protein (111 aa)    
Predicted Functional Partners:
UMN179_01818
N-acetyl-anhydromuranmyl-L-alanine amidase (184 aa)
              0.612
UMN179_01816
Chloride channel protein (464 aa)
              0.579
dusA
tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (326 aa)
              0.579
UMN179_02285
Csm4 family CRISPR-associated RAMP protein (314 aa)
   
          0.495
UMN179_01595
Mu DNA-binding domain-containing protein (159 aa)
   
          0.492
UMN179_00420
Hypothetical protein (980 aa)
   
          0.489
UMN179_01819
Putative major pilin subunit (153 aa)
              0.465
UMN179_02282
Csm1 family CRISPR-associated protein (764 aa)
   
          0.450
UMN179_01820
Type II/IV secretion system protein (469 aa)
              0.442
UMN179_02448
Hypothetical protein (356 aa)
   
          0.438
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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