STRINGSTRING
UMN179_01820 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01820" - Type II/IV secretion system protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01820Type II/IV secretion system protein (469 aa)    
Predicted Functional Partners:
UMN179_01821
Type IV pilin biogenesis protein (402 aa)
 
 
  0.994
UMN179_01819
Putative major pilin subunit (153 aa)
   
   
  0.885
UMN179_01489
Putative outer membrane porin HofQ (380 aa)
 
   
  0.863
UMN179_01822
Type IV leader peptidase family (213 aa)
              0.815
UMN179_00438
Hypothetical protein (186 aa)
   
     
  0.714
UMN179_01818
N-acetyl-anhydromuranmyl-L-alanine amidase (184 aa)
   
   
  0.620
UMN179_00665
Competence protein (794 aa)
 
   
  0.603
UMN179_01010
Prepilin-type N-terminal cleavage/methylation domain-containing protein (177 aa)
   
  0.570
UMN179_01009
Type II secretory pathway, component PulJ (240 aa)
       
  0.457
UMN179_01817
Hypothetical protein (111 aa)
              0.442
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (7%) [HD]