STRINGSTRING
UMN179_01902 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01902" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01902Hypothetical protein (133 aa)    
Predicted Functional Partners:
UMN179_01116
Ferrichrome outer membrane transporter (716 aa)
   
          0.710
UMN179_01288
Hypothetical protein (145 aa)
   
          0.700
UMN179_00006
Hypothetical protein (465 aa)
   
          0.674
UMN179_00852
FeoA domain-containing protein (86 aa)
   
          0.660
UMN179_01536
Branched-chain amino acid transport protein (97 aa)
   
          0.630
UMN179_00158
Serine/threonine protein phosphatase (181 aa)
   
          0.614
UMN179_01901
Beta-methylgalactoside transporter inner membrane protein (336 aa)
              0.557
UMN179_00175
Hypothetical protein (287 aa)
   
          0.539
UMN179_01117
Putative transporter (586 aa)
   
          0.531
UMN179_00496
Hypothetical protein (455 aa)
   
          0.521
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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