STRINGSTRING
UMN179_01935 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01935" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01935Hypothetical protein (120 aa)    
Predicted Functional Partners:
UMN179_01536
Branched-chain amino acid transport protein (97 aa)
   
          0.675
UMN179_01934
Hypothetical protein (63 aa)
              0.625
UMN179_01399
Putative sugar phosphatase (273 aa)
   
          0.591
UMN179_02133
Ferric enterobactin transport protein FepE (401 aa)
   
          0.538
UMN179_01303
Multicopper oxidase (515 aa)
   
          0.494
UMN179_00157
NAD-dependent deacetylase (276 aa)
   
          0.489
UMN179_00306
Lipopolysaccharide biosynthesis protein WzzE (370 aa)
   
          0.433
UMN179_00589
YadA-like C-terminal region protein (228 aa)
   
          0.425
UMN179_01840
Hypothetical protein (3736 aa)
   
          0.410
UMN179_01535
Hypothetical protein (223 aa)
   
          0.407
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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