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UMN179_01966 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01966" - 4-aminobutyrate aminotransferase in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_019664-aminobutyrate aminotransferase (423 aa)    
Predicted Functional Partners:
UMN179_01968
Succinate-semialdehyde dehydrogenase (497 aa)
 
  0.989
UMN179_01161
Succinate-semialdehyde dehydrogenase I (478 aa)
   
  0.978
UMN179_01404
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase (871 aa)
   
  0.934
UMN179_01888
Bifunctional aspartokinase I/homoserine dehydrogenase I (815 aa)
   
 
  0.878
UMN179_00850
Bifunctional aspartate kinase II/homoserine dehydrogenase II (808 aa)
   
 
  0.878
UMN179_01473
Multifunctional fatty acid oxidation complex subunit alpha (715 aa)
     
 
  0.876
UMN179_01757
L-tyrosine decarboxylase (510 aa)
 
  0.867
UMN179_01970
5-methylaminomethyl-2-thiouridine methyltransferase (449 aa)
 
 
    0.831
UMN179_01967
Hypothetical protein (466 aa)
 
        0.826
UMN179_02477
Phosphate acetyltransferase; Involved in acetate metabolism (712 aa)
       
    0.809
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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