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UMN179_01970 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01970" - 5-methylaminomethyl-2-thiouridine methyltransferase in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_019705-methylaminomethyl-2-thiouridine methyltransferase (449 aa)    
Predicted Functional Partners:
UMN179_01968
Succinate-semialdehyde dehydrogenase (497 aa)
 
 
  0.924
UMN179_01966
4-aminobutyrate aminotransferase (423 aa)
 
 
    0.831
UMN179_00072
Sn-glycerol-3-phosphate dehydrogenase subunit C (1022 aa)
   
  0.830
UMN179_01971
Ornithine cyclodeaminase (325 aa)
 
          0.806
UMN179_01967
Hypothetical protein (466 aa)
 
          0.779
UMN179_01965
DNA-binding transcriptional activator GcvA (305 aa)
 
          0.750
UMN179_00696
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (357 aa)
   
 
  0.722
UMN179_01163
4-aminobutyrate aminotransferase (421 aa)
 
 
  0.646
UMN179_01969
Na/H antiporter family protein (487 aa)
 
          0.608
UMN179_01404
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase (871 aa)
   
 
  0.603
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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