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oadG protein (Gallibacterium anatis) - STRING interaction network
"oadG" - Oxaloacetate decarboxylase subunit gamma in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oadGOxaloacetate decarboxylase subunit gamma; Lyase and sodium transporter (88 aa)    
Predicted Functional Partners:
UMN179_01974
Oxaloacetate decarboxylase (609 aa)
 
          0.925
UMN179_01973
Hypothetical protein (435 aa)
 
          0.896
UMN179_01440
Anti-anti-sigma factor (113 aa)
   
          0.736
UMN179_01009
Type II secretory pathway, component PulJ (240 aa)
   
          0.732
UMN179_02177
Virulence factor hemolysin (211 aa)
   
          0.724
UMN179_01010
Prepilin-type N-terminal cleavage/methylation domain-containing protein (177 aa)
   
          0.704
UMN179_01007
Hypothetical protein (98 aa)
   
          0.695
UMN179_02040
Hypothetical protein (96 aa)
   
          0.689
UMN179_02099
Hypothetical protein (267 aa)
   
          0.685
UMN179_00489
Hypothetical protein (163 aa)
   
          0.679
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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