STRINGSTRING
UMN179_01993 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_01993" - Putative periplasmic lipoprotein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_01993Putative periplasmic lipoprotein (119 aa)    
Predicted Functional Partners:
UMN179_01992
lysyl-tRNA synthetase (325 aa)
              0.834
UMN179_01990
Putative transcriptional regulator (113 aa)
 
          0.795
UMN179_02099
Hypothetical protein (267 aa)
   
          0.778
UMN179_02040
Hypothetical protein (96 aa)
   
          0.778
UMN179_01440
Anti-anti-sigma factor (113 aa)
   
          0.778
UMN179_01272
Calcineurin-like phosphoesterase (230 aa)
   
          0.778
UMN179_01007
Hypothetical protein (98 aa)
   
          0.778
UMN179_00918
Sulfur transfer complex subunit TusB (95 aa)
   
          0.778
UMN179_00489
Hypothetical protein (163 aa)
   
          0.778
UMN179_01508
Opacity-associated protein A LysM-like domain-containing protein (406 aa)
   
 
      0.777
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (14%) [HD]