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rlmC protein (Gallibacterium anatis) - STRING interaction network
"rlmC" - 23S rRNA methyluridine methyltransferase in Gallibacterium anatis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rlmC23S rRNA methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA (387 aa)    
Predicted Functional Partners:
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (343 aa)
   
        0.897
UMN179_01994
Thiamine kinase (226 aa)
              0.856
UMN179_01999
Molybdenum cofactor biosynthesis protein MogA (189 aa)
              0.797
UMN179_01219
16S rRNA methyltransferase B (440 aa)
     
  0.794
UMN179_01998
Hypothetical protein (156 aa)
              0.787
UMN179_01997
Nitrogen regulatory protein P-II 1 (112 aa)
              0.787
UMN179_01993
Putative periplasmic lipoprotein (119 aa)
              0.749
UMN179_01436
Putative methyltransferase (357 aa)
 
 
  0.745
UMN179_01992
lysyl-tRNA synthetase (325 aa)
              0.729
rlmD
23S rRNA 5-methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (435 aa)
   
 
0.719
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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