STRINGSTRING
UMN179_02062 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02062" - Transglutaminase-like superfamily in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02062Transglutaminase-like superfamily (368 aa)    
Predicted Functional Partners:
UMN179_02064
Putative mercuric reductase (97 aa)
 
          0.976
UMN179_02063
Putative mercuric transport protein (120 aa)
 
          0.967
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
       
    0.886
UMN179_00656
Hypothetical protein (142 aa)
   
          0.609
UMN179_02061
Hypothetical protein (60 aa)
 
          0.573
UMN179_02208
Hypothetical protein (371 aa)
   
          0.523
UMN179_01557
Hypothetical protein (551 aa)
       
    0.476
UMN179_00586
2’-phosphodiesterase/3’-nucleotidase (651 aa)
       
    0.476
UMN179_00948
Opacity family porin protein (206 aa)
   
          0.448
UMN179_00549
Opacity family porin protein (195 aa)
   
          0.413
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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