STRINGSTRING
UMN179_02147 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02147" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02147Hypothetical protein (438 aa)    
Predicted Functional Partners:
UMN179_02146
UTP-glucose-1-phosphate uridylyltransferase subunit GalU (199 aa)
              0.453
UMN179_01927
HlyD family secretion protein (475 aa)
   
          0.432
UMN179_00957
Type I restriction modification DNA specificity domain-containing protein (361 aa)
 
          0.431
UMN179_00952
Type I restriction enzyme EcoKI subunit R (1082 aa)
 
          0.429
UMN179_02339
CRISPR-associated protein (189 aa)
   
          0.428
UMN179_02145
UTP-glucose-1-phosphate uridylyltransferase subunit GalU (80 aa)
              0.406
UMN179_01205
N-6 DNA Methylase (539 aa)
     
      0.403
UMN179_00966
N-6 DNA Methylase (511 aa)
     
      0.403
UMN179_00643
N-6 DNA Methylase (483 aa)
     
      0.403
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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