STRINGSTRING
UMN179_02246 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02246" - Aromatic amino acid aminotransferase in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02246Aromatic amino acid aminotransferase (396 aa)    
Predicted Functional Partners:
UMN179_01396
Bifunctional chorismate mutase/prephenate dehydratase (383 aa)
   
 
  0.989
UMN179_00180
Bifunctional chorismate mutase/prephenate dehydrogenase (375 aa)
       
  0.988
UMN179_02249
Aminopeptidase N (870 aa)
   
    0.872
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (310 aa)
   
  0.864
UMN179_00516
Isocitrate dehydrogenase (417 aa)
     
  0.861
UMN179_00733
Dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1146 aa)
   
 
  0.854
UMN179_00528
Glutamate synthase subunit alpha (1488 aa)
         
  0.853
UMN179_01026
L-lactate dehydrogenase (304 aa)
     
  0.843
UMN179_01419
Aminotransferase AlaT (404 aa)
   
  0.842
fumC
Fumarate hydratase (464 aa)
     
  0.836
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (11%) [HD]