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UMN179_02254 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02254" - 23S rRNA pseudouridylate synthase B in Gallibacterium anatis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_0225423S rRNA pseudouridylate synthase B (297 aa)    
Predicted Functional Partners:
UMN179_00841
23S rRNA pseudouridylate synthase C; Responsible for synthesis of pseudouridine from uracil (321 aa)
 
  0.865
UMN179_02024
23S rRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil (324 aa)
 
  0.841
UMN179_02253
Hypothetical protein (207 aa)
              0.805
UMN179_01091
23S rRNA/tRNA pseudouridine synthase A (217 aa)
 
  0.791
UMN179_02255
Transcriptional regulator CysB (323 aa)
              0.788
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (507 aa)
 
   
  0.753
UMN179_02274
tRNA pseudouridine synthase C (232 aa)
 
  0.741
UMN179_00064
tRNA pseudouridine synthase C (242 aa)
 
  0.713
UMN179_02252
DNA polymerase III PolC (279 aa)
     
      0.710
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (307 aa)
 
   
  0.628
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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