STRINGSTRING
UMN179_02309 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02309" - Biopolymer transport protein ExbD in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02309Biopolymer transport protein ExbD (129 aa)    
Predicted Functional Partners:
UMN179_02308
Colicin uptake protein TolQ (149 aa)
 
  0.994
UMN179_02310
Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (243 aa)
 
  0.981
UMN179_02045
Colicin uptake protein TolQ (229 aa)
 
  0.893
UMN179_02307
Enterobactin receptor protein (671 aa)
   
 
  0.839
UMN179_02047
Cell envelope integrity inner membrane protein TolA (422 aa)
 
 
  0.705
UMN179_02263
Outer membrane receptor FepA (710 aa)
 
 
  0.649
UMN179_02040
Hypothetical protein (96 aa)
   
          0.618
UMN179_00489
Hypothetical protein (163 aa)
   
          0.615
UMN179_01272
Calcineurin-like phosphoesterase (230 aa)
   
          0.613
UMN179_01007
Hypothetical protein (98 aa)
   
          0.595
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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