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UMN179_02338 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02338" - CRISPR-associated helicase Cas3 in Gallibacterium anatis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02338CRISPR-associated helicase Cas3 (1011 aa)    
Predicted Functional Partners:
UMN179_02340
CRISPR-associated protein (333 aa)
 
        0.882
UMN179_02339
CRISPR-associated protein (189 aa)
 
     
  0.850
UMN179_02342
CRISPR-associated protein (434 aa)
 
          0.848
UMN179_02341
CRISPR-associated protein (335 aa)
 
          0.848
UMN179_02337
Cysteine/glutathione ABC transporter membrane/ATP-binding protein (580 aa)
              0.684
UMN179_02336
Cysteine/glutathione ABC transporter membrane/ATP-binding protein (584 aa)
              0.669
UMN179_02335
Thioredoxin reductase (320 aa)
              0.524
cas1
CRISPR associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (336 aa)
   
   
  0.513
UMN179_02505
Hypothetical protein (93 aa)
   
          0.484
UMN179_02334
Thioredoxin 2 (282 aa)
              0.458
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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