STRINGSTRING
UMN179_02367 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02367" - NinB protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02367NinB protein (141 aa)    
Predicted Functional Partners:
UMN179_02365
Replication protein P (223 aa)
 
          0.956
UMN179_02366
DNA N-6-adenine-methyltransferase (184 aa)
 
          0.909
UMN179_02364
Hypothetical protein (265 aa)
 
          0.902
UMN179_02363
Phage regulatory protein Rha (230 aa)
              0.851
UMN179_02413
Phage minor tail protein L (238 aa)
   
          0.698
UMN179_02417
Bacteriophage lambda tail assembly protein I (196 aa)
   
          0.688
UMN179_02416
Hypothetical protein (244 aa)
   
          0.636
UMN179_02418
Phage-like protein, tail component (2124 aa)
   
          0.633
UMN179_02362
Hypothetical protein (106 aa)
              0.593
UMN179_00820
Protein kinase domain-containing protein (499 aa)
   
          0.551
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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