STRINGSTRING
UMN179_02380 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02380" - Transposase in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02380Transposase (80 aa)    
Predicted Functional Partners:
UMN179_02379
Integrase (101 aa)
          0.908
UMN179_00552
Transposase (173 aa)
 
   
  0.791
UMN179_02382
Transposase (119 aa)
 
   
  0.780
UMN179_01305
Transposase (166 aa)
 
   
  0.772
UMN179_02440
Transposase (173 aa)
 
   
  0.768
UMN179_00547
Integrase (129 aa)
 
          0.600
UMN179_02355
Transposase (119 aa)
 
   
  0.593
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
       
    0.538
UMN179_02381
Hypothetical protein (54 aa)
              0.482
UMN179_00835
2-octaprenyl-6-methoxyphenyl hydroxylase (395 aa)
       
    0.464
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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