STRINGSTRING
UMN179_02382 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02382" - Transposase in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02382Transposase (119 aa)    
Predicted Functional Partners:
UMN179_02381
Hypothetical protein (54 aa)
              0.859
UMN179_02380
Transposase (80 aa)
 
   
  0.780
UMN179_02438
Transposase (51 aa)
 
   
  0.755
UMN179_02379
Integrase (101 aa)
   
   
  0.667
UMN179_02385
Hypothetical protein (108 aa)
              0.645
UMN179_02384
Hypothetical protein (135 aa)
              0.645
UMN179_02383
Phage holin family (79 aa)
              0.645
UMN179_01304
Integrase (275 aa)
 
   
  0.606
UMN179_02439
Transposase (80 aa)
 
   
  0.593
UMN179_01313
Integrase (348 aa)
 
   
  0.514
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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