STRINGSTRING
UMN179_02383 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02383" - Phage holin family in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02383Phage holin family (79 aa)    
Predicted Functional Partners:
UMN179_02384
Hypothetical protein (135 aa)
 
          0.885
UMN179_02385
Hypothetical protein (108 aa)
              0.859
UMN179_02404
Hypothetical protein (102 aa)
 
          0.679
UMN179_02244
Putative hemagglutinin (2713 aa)
   
          0.676
UMN179_02237
Hypothetical protein (352 aa)
   
          0.646
UMN179_02382
Transposase (119 aa)
              0.645
UMN179_02381
Hypothetical protein (54 aa)
              0.645
UMN179_00496
Hypothetical protein (455 aa)
   
          0.552
UMN179_02445
Putative hemagglutinin (2943 aa)
   
          0.545
UMN179_00416
Hemagglutination protein (3058 aa)
   
          0.541
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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